Bins that were identified in single profile 'XY MERGED' and stored in the database as "56 GENOME BINS" collection, describe 56 bins accountig for 173,149,295 nucleotides, which represent 100.00% of all nucleotides stored in the annotation database, and 100.00% of nucleotides stored in the profile database.
The single profile database that was generated with the minimum contig length of 1,000 contained 56 contigs, which correspond to 100% of all contigs, and 100% of all nucleotides found in the annotation database.
Profile DB for XY MERGED w/ 16 samples.
Key Value
Created on 2015-06-15 11:09:11
Version 5
Minimum conting length 1,000
Number of contigs 56
Number of splits 8,657
Total nucleotides 173.15 Mb
Annotation DB
Key Value
Created on 2015-06-15 11:09:11
Version 3
Split length 20,000
Number of contigs 56
Number of splits 8,657
Total nucleotides 173.15 Mb
K-mer size 4

Summary of general characteristics of each bin.

Bin Taxonomy Total Size Num Contigs N50 GC Content Compl. Red.
 
Bin_11 N/A 1 3,098,829 45.83% 4.82%
 
Bin_1 N/A 1 3,215,024 49.31% 5.00%
 
Bin_44 N/A 1 4,313,027 40.28% 4.16%
 
Bin_5 N/A 1 2,289,153 62.16% 4.20%
 
Bin_21 N/A 1 4,580,665 37.45% 8.43%
 
Bin_2 N/A 1 2,940,305 55.59% 5.54%
 
Bin_12 N/A 1 2,536,210 62.35% 6.81%
 
Bin_13 N/A 1 3,232,844 62.33% 3.64%
 
Bin_41 N/A 1 5,200,519 50.26% 5.95%
 
Bin_9 N/A 1 2,317,008 62.89% 4.20%
 
Bin_19 N/A 1 2,665,539 58.14% 5.18%
 
Bin_7 N/A 1 3,174,876 63.74% 4.15%
 
Bin_22 N/A 1 2,561,340 55.00% 3.97%
 
Bin_40 N/A 1 3,316,125 42.22% 1.99%
 
Bin_36 N/A 1 3,490,417 51.19% 8.38%
 
Bin_52 N/A 1 2,813,493 64.11% 10.50%
 
Bin_8 N/A 1 2,081,690 58.58% 8.11%
 
Bin_35 N/A 1 3,294,051 50.04% 2.64%
 
Bin_20 N/A 1 2,624,259 59.11% 2.10%
 
Bin_15 N/A 1 2,391,188 62.91% 6.19%
 
Bin_33 N/A 1 6,343,932 56.35% 5.27%
 
Bin_3 N/A 1 2,563,362 62.16% 5.00%
 
Bin_45 N/A 1 1,569,804 32.13% 3.64%
 
Bin_18 N/A 1 2,184,929 51.23% 4.92%
 
Bin_34 N/A 1 5,171,850 63.72% 4.16%
 
Bin_53 N/A 1 2,156,349 45.93% 9.73%
 
Bin_42 N/A 1 2,387,121 34.04% 7.92%
 
Bin_16 N/A 1 3,208,465 66.37% 3.64%
 
Bin_55 N/A 1 2,230,547 44.15% 2.17%
 
Bin_51 N/A 1 2,184,435 45.89% 2.97%
 
Bin_32 N/A 1 2,841,899 70.70% 1.03%
 
Bin_27 N/A 1 2,595,590 58.01% 3.34%
 
Bin_17 N/A 1 3,456,733 67.01% 4.71%
 
Bin_29 N/A 1 2,403,258 57.20% 0.00%
 
Bin_4 N/A 1 2,965,968 62.30% 1.66%
 
Bin_49 N/A 1 2,225,740 48.79% 0.58%
 
Bin_14 N/A 1 3,134,128 63.29% 1.26%
 
Bin_24 N/A 1 3,124,763 58.04% 4.00%
 
Bin_23 N/A 1 2,395,162 59.06% 2.28%
 
Bin_26 N/A 1 2,766,990 62.51% 4.00%
 
Bin_54 N/A 1 2,620,859 58.78% 1.43%
 
Bin_47 N/A 1 2,464,809 35.63% 9.83%
 
Bin_37 N/A 1 3,323,194 66.06% 0.41%
 
Bin_56 N/A 1 2,481,610 54.13% 3.06%
 
Bin_6 N/A 1 3,885,331 65.79% 1.21%
 
Bin_50 N/A 1 4,380,710 58.63% 6.36%
 
Bin_10 N/A 1 10,281,688 50.42% 15.88%
 
Bin_28 N/A 1 2,337,859 57.56% 0.23%
 
Bin_48 N/A 1 2,854,856 64.29% 5.57%
 
Bin_38 N/A 1 2,318,532 62.86% 1.52%
 
Bin_25 N/A 1 2,348,196 41.63% 0.80%
 
Bin_39 N/A 1 2,528,572 60.41% 1.21%
 
Bin_30 N/A 1 2,551,294 67.98% 0.18%
 
Bin_31 N/A 1 3,505,501 63.34% 6.39%
 
Bin_43 N/A 1 2,853,703 38.55% 0.41%
 
Bin_46 N/A 1 2,364,994 59.00% 0.62%

TAB-delimited matrix file for abundance: bins_across_samples/abundance.txt

Bin OS_A OS_B OS_C OS_D OS_E OS_F OS_G OS_H OS_I6 ... OS_I6 ... ...
 
Bin_11 0.06 0.01 0.17 2.23 1.03 3.36 3.49 0.98 0.22 0.11 ...
 
Bin_1 5.37 2.95 1.54 2.61 3.63 2.90 3.08 0.03 0.02 0.01 ...
 
Bin_44 0.00 0.00 5.01 0.00 0.00 0.00 0.00 0.00 0.00 0.00 ...
 
Bin_5 2.19 0.85 0.38 2.49 0.90 0.75 1.43 0.59 0.00 0.00 ...
 
Bin_21 0.00 4.91 0.01 0.15 0.00 0.00 0.00 0.00 0.00 0.00 ...
 
Bin_2 1.53 2.01 0.64 0.47 1.26 3.63 3.34 0.03 0.06 0.03 ...
 
Bin_12 0.62 0.36 0.21 0.16 3.36 2.31 2.45 0.01 0.00 0.00 ...
 
Bin_13 0.53 0.43 0.15 0.91 2.46 2.07 2.62 0.56 0.01 0.01 ...
 
Bin_41 0.39 0.00 8.43 0.00 0.00 0.00 0.00 0.00 0.00 0.00 ...
 
Bin_9 5.94 2.55 3.16 7.53 17.48 12.91 20.59 3.57 0.05 0.05 ...
 
Bin_19 0.00 0.00 0.00 0.00 1.33 1.41 0.98 0.50 0.00 0.00 ...
 
Bin_7 7.65 8.70 5.08 0.49 11.58 6.98 2.89 0.02 0.00 0.00 ...
 
Bin_22 5.30 4.93 1.95 5.80 0.07 0.65 0.05 0.01 0.01 0.00 ...
 
Bin_40 0.17 0.00 6.46 0.00 0.00 0.00 0.00 0.00 0.00 0.00 ...
 
Bin_36 0.13 0.19 0.05 1.72 0.02 1.55 0.11 2.79 1.30 0.73 ...
 
Bin_52 0.03 0.04 0.01 0.02 0.00 0.02 0.00 0.00 0.96 0.82 ...
 
Bin_8 5.67 5.30 1.74 15.43 5.17 8.49 5.49 2.93 0.04 0.02 ...
 
Bin_35 0.00 0.00 0.00 1.12 0.00 0.59 0.00 8.63 0.00 0.01 ...
 
Bin_20 0.00 0.00 0.00 0.00 2.85 0.33 1.91 2.43 0.00 0.01 ...
 
Bin_15 0.00 0.00 0.00 0.00 0.21 1.08 1.54 0.44 0.00 0.00 ...
 
Bin_33 0.62 0.66 0.14 1.38 0.23 0.88 0.38 4.53 7.67 7.01 ...
 
Bin_3 2.33 2.91 0.79 0.24 1.40 1.56 2.42 0.09 0.00 0.00 ...
 
Bin_45 0.00 0.00 3.67 0.00 0.00 0.00 0.00 0.00 0.00 0.00 ...
 
Bin_18 0.00 0.00 0.00 0.00 0.73 0.01 1.60 0.08 0.00 0.00 ...
 
Bin_34 0.01 0.01 0.00 1.76 0.05 0.31 0.15 7.18 0.05 0.03 ...
 
Bin_53 0.08 0.12 0.04 0.04 0.00 0.02 0.00 0.00 0.89 0.88 ...
 
Bin_42 0.00 0.00 2.45 0.00 0.00 0.00 0.00 0.00 0.00 0.00 ...
 
Bin_16 0.00 0.00 0.00 0.00 0.23 1.60 1.35 0.36 0.00 0.00 ...
 
Bin_55 0.39 0.40 0.17 0.32 0.01 0.05 0.01 0.02 2.13 2.10 ...
 
Bin_51 0.08 0.10 0.03 0.03 0.00 0.02 0.00 0.00 1.20 1.21 ...
 
Bin_32 0.61 0.51 0.11 1.48 0.10 1.32 0.36 2.38 7.95 6.57 ...
 
Bin_27 1.24 1.28 0.38 2.97 0.01 0.10 0.04 0.02 0.10 0.06 ...
 
Bin_17 0.25 0.22 0.09 0.11 0.83 0.60 1.65 0.14 0.01 0.01 ...
 
Bin_29 0.13 0.13 0.03 0.01 0.00 0.15 0.01 0.02 12.09 16.50 ...
 
Bin_4 3.36 5.84 1.60 0.55 0.64 0.84 0.70 0.12 0.00 0.00 ...
 
Bin_49 0.04 0.05 0.02 0.04 0.01 0.02 0.01 0.04 0.34 0.33 ...
 
Bin_14 0.00 0.00 0.00 0.00 0.12 0.49 1.47 1.02 0.00 0.00 ...
 
Bin_24 6.24 3.79 1.90 2.69 0.10 0.35 0.12 0.02 0.00 0.00 ...
 
Bin_23 3.81 2.52 1.00 3.79 0.10 0.38 0.09 0.10 0.00 0.00 ...
 
Bin_26 1.91 1.14 0.59 0.66 0.09 0.39 0.10 0.03 0.00 0.00 ...
 
Bin_54 0.11 0.15 0.03 0.03 0.00 0.02 0.00 0.00 0.81 0.74 ...
 
Bin_47 0.09 0.12 0.06 0.18 0.00 0.01 0.00 0.04 0.49 0.52 ...
 
Bin_37 0.05 0.07 0.03 2.42 0.29 0.19 0.76 3.34 0.05 0.04 ...
 
Bin_56 0.38 0.53 0.12 0.13 0.04 0.14 0.08 0.04 2.88 2.35 ...
 
Bin_6 1.47 1.57 0.60 1.24 0.96 1.88 0.84 1.24 0.59 0.49 ...
 
Bin_50 0.06 0.07 0.02 0.03 0.00 0.02 0.00 0.01 0.57 0.45 ...
 
Bin_10 0.00 0.00 0.00 0.00 1.48 0.00 0.43 0.01 0.00 0.00 ...
 
Bin_28 0.63 0.71 0.13 0.59 0.06 0.19 0.23 0.53 2.15 1.46 ...
 
Bin_48 0.02 0.02 0.00 0.02 0.00 0.01 0.00 0.01 0.27 0.24 ...
 
Bin_38 0.21 0.25 0.11 0.52 0.47 0.47 0.38 1.01 0.08 0.06 ...
 
Bin_25 1.83 1.43 1.22 0.19 0.10 0.35 0.03 0.00 0.00 0.00 ...
 
Bin_39 0.06 0.08 0.03 0.38 0.23 0.21 0.27 2.55 0.08 0.06 ...
 
Bin_30 0.03 0.04 0.00 0.01 0.00 0.09 0.00 0.00 5.06 5.05 ...
 
Bin_31 0.08 0.09 0.02 0.02 0.00 0.13 0.01 0.00 4.79 6.25 ...
 
Bin_43 0.07 0.03 2.30 0.00 0.00 0.00 0.00 0.00 0.00 0.00 ...
 
Bin_46 0.20 0.28 0.08 0.12 0.02 0.10 0.08 0.04 1.02 0.92 ...

TAB-delimited matrix file for variability: bins_across_samples/variability.txt

Bin OS_A OS_B OS_C OS_D OS_E OS_F OS_G OS_H OS_I6 ... OS_I6 ... ...
 
Bin_11 1.22 0.46 0.06 0.32 14.52 157.34 361.59 0.06 0.00 0.00 ...
 
Bin_1 225.56 53.88 11.21 0.46 254.78 92.44 306.68 0.00 0.00 0.00 ...
 
Bin_44 0.00 0.00 8.88 0.00 0.00 0.00 0.00 0.00 0.00 0.00 ...
 
Bin_5 15.17 0.06 0.00 0.71 4.06 0.09 92.11 0.55 0.00 0.00 ...
 
Bin_21 0.00 13.33 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 ...
 
Bin_2 6.10 16.14 0.65 0.00 23.14 216.97 392.12 0.00 0.00 0.00 ...
 
Bin_12 0.83 0.34 0.20 0.00 257.89 47.99 273.19 0.00 0.00 0.00 ...
 
Bin_13 0.00 0.00 0.00 0.00 121.04 24.48 250.94 0.00 0.00 0.00 ...
 
Bin_41 0.00 0.00 5.99 0.00 0.00 0.00 0.00 0.00 0.00 0.00 ...
 
Bin_9 191.88 19.60 89.34 68.25 915.47 493.54 1.49 Kb 19.85 0.24 0.21 ...
 
Bin_19 0.00 0.00 0.00 0.00 12.07 3.77 17.65 0.00 0.00 0.00 ...
 
Bin_7 4.28 4.29 3.57 0.00 12.99 8.01 4.70 0.00 0.00 0.00 ...
 
Bin_22 232.28 223.29 35.26 48.78 0.00 0.22 0.29 0.00 0.00 0.00 ...
 
Bin_40 0.00 0.00 420.83 0.00 0.00 0.00 0.00 0.00 0.00 0.00 ...
 
Bin_36 0.00 0.00 0.00 0.15 0.00 7.46 0.00 14.03 0.00 0.00 ...
 
Bin_52 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.06 ...
 
Bin_8 360.88 356.79 74.98 491.03 535.82 630.45 807.83 49.25 0.00 0.00 ...
 
Bin_35 0.00 0.00 0.00 0.00 0.00 0.22 0.00 353.67 0.00 0.00 ...
 
Bin_20 0.00 0.00 0.00 0.00 244.86 0.00 242.61 14.63 0.00 0.00 ...
 
Bin_15 0.00 0.00 0.00 0.00 0.08 0.42 45.97 0.00 0.00 0.00 ...
 
Bin_33 0.10 0.19 0.00 0.39 0.45 0.63 1.04 42.53 0.29 0.19 ...
 
Bin_3 35.08 91.53 1.20 0.00 40.10 11.15 296.45 0.00 0.00 0.00 ...
 
Bin_45 0.00 0.00 2.96 0.00 0.00 0.00 0.00 0.00 0.00 0.00 ...
 
Bin_18 0.00 0.00 0.00 0.00 2.37 0.00 13.54 0.38 0.00 0.00 ...
 
Bin_34 0.00 0.00 0.00 0.09 0.00 0.00 0.02 186.24 0.00 0.00 ...
 
Bin_53 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 ...
 
Bin_42 0.00 0.00 5.01 0.00 0.00 0.00 0.00 0.00 0.00 0.00 ...
 
Bin_16 0.00 0.00 0.00 0.00 0.11 7.87 76.16 0.12 0.00 0.00 ...
 
Bin_55 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 ...
 
Bin_51 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 ...
 
Bin_32 0.00 0.00 0.00 0.09 0.00 4.75 0.42 10.50 0.45 0.15 ...
 
Bin_27 1.76 1.07 0.00 1.80 0.00 0.00 0.00 0.00 0.00 0.00 ...
 
Bin_17 0.00 0.00 0.00 0.00 1.45 0.07 81.12 0.00 0.04 0.00 ...
 
Bin_29 1.35 0.60 0.57 0.00 0.12 0.46 0.31 0.06 4.12 20.41 ...
 
Bin_4 127.87 297.19 27.15 0.00 1.71 0.76 10.30 0.00 0.00 0.00 ...
 
Bin_49 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.43 0.06 ...
 
Bin_14 0.00 0.00 0.00 0.00 0.00 0.00 0.68 0.04 0.00 0.00 ...
 
Bin_24 267.43 142.45 32.63 2.56 0.00 0.06 0.34 0.00 0.00 0.00 ...
 
Bin_23 226.41 100.23 4.59 12.05 0.42 0.00 0.00 0.00 0.00 0.00 ...
 
Bin_26 11.87 8.06 0.24 0.00 0.00 0.00 0.00 0.00 0.00 0.00 ...
 
Bin_54 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 ...
 
Bin_47 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 ...
 
Bin_37 0.00 0.00 0.00 0.67 0.04 0.00 3.95 11.72 0.00 0.00 ...
 
Bin_56 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 ...
 
Bin_6 2.37 3.47 0.07 0.00 4.21 13.63 9.70 0.08 0.00 0.00 ...
 
Bin_50 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 ...
 
Bin_10 0.00 0.00 0.00 0.00 14.36 0.00 0.12 0.00 0.00 0.00 ...
 
Bin_28 0.00 0.00 0.05 0.00 0.00 0.00 0.00 0.00 0.00 0.00 ...
 
Bin_48 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.07 0.00 0.00 ...
 
Bin_38 0.00 0.00 0.00 0.00 0.00 0.00 0.22 0.00 0.00 0.00 ...
 
Bin_25 7.65 1.44 5.99 0.00 0.00 0.00 0.00 0.00 0.00 0.00 ...
 
Bin_39 0.00 0.00 0.00 0.08 0.00 0.00 0.00 5.39 0.00 0.00 ...
 
Bin_30 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.19 0.40 ...
 
Bin_31 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.09 0.11 ...
 
Bin_43 0.00 0.00 2.48 0.00 0.00 0.00 0.00 0.00 0.00 0.00 ...
 
Bin_46 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.05 0.00 0.00 ...

TAB-delimited matrix file for relative_abundance: bins_across_samples/relative_abundance.txt

Bin OS_A OS_B OS_C OS_D OS_E OS_F OS_G OS_H OS_I6 ... OS_I6 ... ...
 
Bin_11 0.00 0.00 0.01 0.19 0.09 0.31 0.32 0.07 0.00 0.00 ...
 
Bin_1 0.25 0.13 0.07 0.11 0.17 0.13 0.14 0.00 0.00 0.00 ...
 
Bin_44 0.00 0.00 1.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 ...
 
Bin_5 0.25 0.08 0.03 0.27 0.10 0.07 0.16 0.04 0.00 0.00 ...
 
Bin_21 0.00 0.99 0.00 0.01 0.00 0.00 0.00 0.00 0.00 0.00 ...
 
Bin_2 0.12 0.16 0.04 0.02 0.10 0.29 0.27 0.00 0.00 0.00 ...
 
Bin_12 0.05 0.02 0.01 0.00 0.38 0.26 0.28 0.00 0.00 0.00 ...
 
Bin_13 0.04 0.03 0.01 0.07 0.28 0.24 0.30 0.04 0.00 0.00 ...
 
Bin_41 0.03 0.00 0.97 0.00 0.00 0.00 0.00 0.00 0.00 0.00 ...
 
Bin_9 0.08 0.03 0.04 0.10 0.24 0.18 0.28 0.05 0.00 0.00 ...
 
Bin_19 0.00 0.00 0.00 0.00 0.33 0.35 0.25 0.07 0.00 0.00 ...
 
Bin_7 0.18 0.20 0.12 0.00 0.27 0.16 0.07 0.00 0.00 0.00 ...
 
Bin_22 0.29 0.27 0.10 0.31 0.00 0.03 0.00 0.00 0.00 0.00 ...
 
Bin_40 0.01 0.00 0.99 0.00 0.00 0.00 0.00 0.00 0.00 0.00 ...
 
Bin_36 0.00 0.01 0.00 0.21 0.00 0.22 0.01 0.40 0.05 0.02 ...
 
Bin_52 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 ...
 
Bin_8 0.11 0.11 0.03 0.31 0.10 0.17 0.11 0.06 0.00 0.00 ...
 
Bin_35 0.00 0.00 0.00 0.08 0.00 0.05 0.00 0.87 0.00 0.00 ...
 
Bin_20 0.00 0.00 0.00 0.00 0.39 0.03 0.26 0.32 0.00 0.00 ...
 
Bin_15 0.00 0.00 0.00 0.00 0.04 0.35 0.53 0.08 0.00 0.00 ...
 
Bin_33 0.02 0.02 0.00 0.04 0.01 0.03 0.01 0.18 0.24 0.22 ...
 
Bin_3 0.20 0.26 0.06 0.01 0.12 0.14 0.21 0.00 0.00 0.00 ...
 
Bin_45 0.00 0.00 1.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 ...
 
Bin_18 0.00 0.00 0.00 0.00 0.29 0.00 0.70 0.01 0.00 0.00 ...
 
Bin_34 0.00 0.00 0.00 0.17 0.00 0.02 0.01 0.80 0.00 0.00 ...
 
Bin_53 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 ...
 
Bin_42 0.00 0.00 1.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 ...
 
Bin_16 0.00 0.00 0.00 0.00 0.04 0.49 0.42 0.05 0.00 0.00 ...
 
Bin_55 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.01 0.01 ...
 
Bin_51 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 ...
 
Bin_32 0.01 0.01 0.00 0.02 0.00 0.03 0.01 0.05 0.13 0.11 ...
 
Bin_27 0.21 0.22 0.05 0.52 0.00 0.00 0.00 0.00 0.00 0.00 ...
 
Bin_17 0.03 0.03 0.01 0.00 0.24 0.15 0.52 0.01 0.00 0.00 ...
 
Bin_29 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.34 0.48 ...
 
Bin_4 0.26 0.45 0.12 0.02 0.04 0.06 0.05 0.00 0.00 0.00 ...
 
Bin_49 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 ...
 
Bin_14 0.00 0.00 0.00 0.00 0.02 0.13 0.55 0.31 0.00 0.00 ...
 
Bin_24 0.42 0.26 0.13 0.17 0.00 0.01 0.00 0.00 0.00 0.00 ...
 
Bin_23 0.34 0.22 0.08 0.32 0.00 0.02 0.00 0.00 0.00 0.00 ...