anvi-script-merge-collections [program]

Generate an additional data file from multiple collections.

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Can provide

Can consume

contigs-db collection-txt


This program outputs a file that denotes which contigs and splits are part of which collection-txt files. This just tells you which collections each of your contigs are a part of, which can be imported as acategorical layer with anvi-import-misc-data.

This is not super useful, but it is used in the Infant gut tutorial here.

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Additional Resources

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