A TXT-type anvi’o artifact. This artifact can be generated, used, and/or exported by anvi’o. It can also be provided by the user for anvi’o to import into its databases, process, and/or use.
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There are no anvi’o tools that use or require this artifact directly, which means it is most likely an end-product for the user.
This is the output tables that are displayed when you run anvi-estimate-scg-taxonomy or anvi-estimate-trna-taxonomy, but formatted as a tab-delimited text file.
To get this output, just provide the
-o or the
-O flag when running anvi-estimate-scg-taxonomy or anvi-estimate-trna-taxonomy.
These contain the exact same information as is normally displayed in the terminal, just in a separate file that is easier to share or include as supplemental data. To see an explination of the data within this file, you can look at the page for genome-taxonomy.
Edit this file to update this information.