anvi-export-state [program]

Export an anvi'o state into a profile database.

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A. Murat Eren (Meren)

Can consume

pan-db profile-db state

Can provide



This program allows you to export a state from a pan-db or profile-db. The output of this is a state-json, which you can import into another anvi’o project with anvi-import-state.

You can run this program on a profile-db or pan-db as follows:

anvi-export-state -s state \ -p profile-db \ -o path/to/output

To list the collections available in this database, you can run

anvi-export-state -p pan-db \ --list-states

Edit this file to update this information.

Additional Resources

Are you aware of resources that may help users better understand the utility of this program? Please feel free to edit this file on GitHub. If you are not sure how to do that, find the __resources__ tag in this file to see an example.