A DB-type anvi’o artifact. This artifact is typically generated, used, and/or exported by anvi’o (and not provided by the user)..
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A tRNA-seq database is an anvi’o database that contains tRNA sequences predicted from a trnaseq-fasta for a sample, and associated information.
This database is the key output of anvi-trnaseq, which predicts which input sequences are tRNA, clusters them into discrete biological sequences, and predicts positions in the sequences that are the sites of nucleotide modifications. The database therefore contains tables of information produced by each part of the process.
This database is the key input to anvi-convert-trnaseq-database, which takes one or more databases comprising the samples of an experiment and generates a contigs-db of tRNA seed sequences and profile-db. These can then be displayed and manipulated in anvi’o like other ‘omics data.
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