detection-txt

A TXT-type anvi’o artifact. This artifact is typically generated, used, and/or exported by anvi’o (and not provided by the user)..

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Provided by

anvi-export-gene-coverage-and-detection

Required or used by

There are no anvi’o tools that use or require this artifact directly, which means it is most likely an end-product for the user.

Description

This is a text file containing the detection value for each gene in each sample that was in the profile-db and contigs-db that you used when you ran anvi-export-gene-coverage-and-detection.

This is a tab-delimited file where each row describes a specific gene and each column describes one of your samples. Each cell contains the detection of that gene in that sample.

Example

key       sample_1    sample_2    sample_3 ...
13947     0.291093    0.984394    0.9289432         
13948     0.895842    0.828481    0.3721947
23026     0.949383    0.983923    1.0000000
...

Edit this file to update this information.