anvi-pan-genome-graph

An anvi'o program to compute a graph representation of pangenomes. It will do its magic, and store it into your pan-db, or report a JSON formatted graph file, for downstream visualization and analyses with anvi-display-pan-graph.

🔙 To the main page of anvi’o programs and artifacts.

Authors

Can consume

pan-db genomes-storage-db external-genomes

Can provide

pan-graph-db

Usage

No one has described the usage of this program :/ If you would like to contribute, please see previous examples here, and feel free to add a Markdown formatted file in that directory named “anvi-pan-genome-graph.md”. For a template, you can use the markdown file for anvi-gen-contigs-database. THANK YOU!

Additional Resources

Are you aware of resources that may help users better understand the utility of this program? Please feel free to edit this file on GitHub. If you are not sure how to do that, find the __resources__ tag in this file to see an example.