A TXT-type anvi’o artifact. This artifact can be generated, used, and/or exported by anvi’o. It can also be provided by the user for anvi’o to import into its databases, process, and/or use.
🔙 To the main page of anvi’o programs and artifacts.
View data refers to a matrx where each column represents a specific sample and each row describes some attribute of that sample (most often a sequence’s abundance per sample).
For example, in the pangenomics tutorial, the
PROCHLORO-functions-occurrence-frequency.txt is a view-data.
You can use this to compute a distance matrix to generate a dendrogram (using anvi-matrix-to-newick) or direclty input it to anvi-interactive to visualize the distribution of your items across samples.
Edit this file to update this information.