Tom O. Delmont of anvi'o
Bio
Microbial ecologist who seeks to understand small and large-scale ecological patterns in the microbial world.
Affiliations
currentCNRS, Genoscope - Centre National de SéquençagepastPost-doctoral Scientist, University of ChicagopastPost-doctoral Scientist, Marine Biological Laboratory
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Intellectual contributions
Some contributions are more than code. Inevitably, this manually curated list will be incomplete for almost everyone, but nevertheless, we try to keep track of key contributions made by memebers of the anvi'o commmunity to the platform and its users. Edit these files to help.
- Initiated and supervised the development of anvi'o tools to reconstruct genomes from metagenomes.
Resource contributions
Tutorials and exercises
Kinds of write-ups that typically use mock or simple datasets to describe basic concepts and how to accomplish common tasks in anvi'o often with hands-on experience.
A theoretical tutorial describing how to characterize SNVs, SCVs and SAAVs with anvi’o, and how to interpret the output.
A tutorial that walks you through some of the most fundamental aspects of anvi'o and its application to a real-world dataset organized in multiple interconnected chapters, which all use the same dataset.
Articles, workflows, opinions
Key insights into specific topics and can be useful to more advanced users and 'omics enthusiasts in general.
A demonstration of how to reconstruct genomes of giant viruses.
An easy-to-follow diary of resolving a composite Lokiarchaeum genome bin.