Binning
Table of Contents
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Tutorials and exercises
Tutorials are the best way to start learning anvi’o. They typically use mock or simple datasets to describe basic concepts and how to accomplish common tasks in anvi’o often with hands-on experience (add more here).
A tutorial that walks you through some of the most fundamental aspects of anvi'o and its application to a real-world dataset organized in multiple interconnected chapters, which all use the same dataset.
Workshops
Previous and upcoming workshops for a hands-on experience of anvi’o.
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Technical write-ups
Articles listed this section offer solutions or discussions regarding matters that are typically more technical than scientific (add more here).
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Articles, workflows, opinions
These resources often cover key insights into specific topics and can be useful to more advanced users and ‘omics enthusiasts in general (add more here).
A visual demonstration of the shortcomings of automatic binning of genomes from complex environments using short-read assemblies.
A demonstration of how to reconstruct genomes of giant viruses.
Using metabolism estimation to go fishing in some ocean metagenomes.
An easy-to-follow diary of resolving a composite Lokiarchaeum genome bin.
Developer and contributor resources
Here you will find technical documentation to help you learn how to contribute to anvi’o, as a developer or otherwise (add more here).
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